Pressure layer combines all human activities that cause changes to hydrological conditions. The human activities were presented as point data which were given spatial extents (given below). The pressure value was given as the proportion of the grid cell under the pressure. The following human activities were combined into the changes to hydrological conditions layer; - Hydropower dams (a 1km2 grid cell in the river estuary was selected) - Water course modification (1 km) - Wind turbines (operational, 0.3 km, linear decline) - Oil platforms (0.5 km, linear decline) The human activity datasets were first processed separately covering the whole Baltic Sea and then summed together and overlapping areas were dissolved to remove double counting. Attenuation gradients are assigned to each layer as described above. Area effected decreases when distance from avtivity increases. Layer was normalized.

The occurrence of suitable nursery habitats is crucial for maintaining fish populations (Sundblad et al. 2013). Species distribution modelling studies have shown the importance of suitable environmental conditions for pikeperch recruitment. Due to lack of coherent data on pikeperch spawning and nursery areas across the Baltic Sea countries, environmental variables were used in delineating potential recruitment areas for pikeperch. The pikeperch recruitment area presented on the map is mainly delineated by selecting areas where depth < 5 m, logged exposure < 5, salinity < 7 PSU, Secchi depth < 2 m and distance to deep (10m) water < 4km. The threshold values have been obtained from literature (Veneranta et al. 2011, Bergström et al. 2013, Sundblad et al. 2013, Kallasvuo et al. 2016). Temperature, although important for pikeperch, was left out due to high variation in timing of suitable spawning temperatures across the Baltic Sea. In Finnish coastal waters, a national pikeperch model (Kallasvuo et al. 2016) has been used, with very suitable areas for pikeperch generalized to 1 km grid. In Sweden, the areas delineated by environmental variables have been complemented with information from national interview survey (Gunnartz et al. 2011) as well as expert opinion.

Broad-scale habitat maps for the Baltic Sea have been produced in the EUSeaMap project in 2016. For German and Estonian marine areas, national (more accurate) datasets were used. German data included both substrate and light information (division into infralittoral/circalittoral). Estonian data included only substrate and the division into light regimes was obtained from the EuSeaMap data. Here, the habitat class “circalittoral hard substrate” includes classes “Rock and other hard substrate” and “Coarse substrate” of the original data, in the circalittoral zone. The original polygon maps have been converted to 1 km x 1 km grid. The scale of the substrate data used in broad-scale habitat maps varies from 1:250 000 to 1:1M (data from EMODnet Geology). Coarser resolution data has been used in areas, where 1: 250 000 substrate data has not been available. Due to different scales used, the habitat classes may show different sized patterns in different areas.

Pressure layer combines all human activities that cause physical disturbance or damage to seabed. For several human activity datasets, spatial extents were given (table below). Buffers with decreasing value rates were applied to represent the impact distance of physical disturbance. The following human activities were combined into the physical disturbance layer; - Cables (under construction, 1 km buffer) - Coastal defence and flood protection (under construction, 500 m buffer) - Deposit of dredged material (500 m buffer for points and areas) - Dredging (maintenance) (500 m buffer for points and areas) - Extraction of sand and gravel (500 m buffer) - Finfish mariculture (1 km buffer) - Fishing intensity 2011-2016 average (subsurface swept area ratio) - Furcellaria harvesting - Pipelines (0,3 km buffer) - Recreational boating and sports - Shellfish mariculture - Shipping density - Wind farms (under construction) (1 km buffer) - Wind farms (operational) (0,1 km buffer) The human activity data sets were first processed separately covering the whole Baltic Sea and then summed together. In this integration, some data layers were down-weighted to arrive at a balanced pressure layer, as described below. High pressure intensity and/or slow recovery (weighting factor 1): Coastal defence and flood protection, Deposit of dredged material, Dredging, Extraction of sand and gravel and Fishing intensity Moderate to high (Weighting factor 0,8): Pipelines and Shipping density Moderate (Weighting factor 0,6): Finfish mariculture, Shellfish mariculture and Wind farms (under construction) Low to moderate (Weighting factor 0,4): Cables Low (Weighting factor 0,2): Maerl and Furcellaria harvesting, Recreational boating and sports and Wind farms (operational) Harbours and marinas were left out from the physical disturbance pressure to avoid double counting due to their representation in the shipping density and recreational boating and sports data sets.

Concentration of phosphorus pressure layer is interpolated from annual seasonal average of total phosphorus measurements from surface waters (0-10 m) extracted from ICES’s oceanographic database, database of Swedish Meteorological and Hydrological Institute, EEA’s Eionet database and Data from Gulf of Finland year 2014. The points were interpolated to cover the entire Baltic Sea with Spline with barriers interpolation method. Values were log-transformed and normalised (more detailed description below).

This layer is based on data from the BIAS project representing ambient underwater noise, modelled into a 0.5 km x 0.5 km grid, and representing sound pressure levels at 1/3 octave bands of 125 Hz exceeded at least 5% of the time. Measured and modelled acoustic data is provided as Sound Pressure Level (SPL). The time period for the data is annual values for year 2014. The selected depth interval is 0 m – bottom to represent the ambient underwater noise in the whole water column. The data were normalized setting level 0 at 92 db re 1µPa and level 1 at 127 db re 1µPa.

Mudflats and sandflats not covered by seawater at low tide (according to Habitats Directive Annex I) are often devoid of vascular plants, usually coated by blue algae and diatoms. They are of particular importance as feeding grounds for wildfowl and waders. The distribution map is based on data submission by HELCOM contracting parties. Only Denmark, Germany and Estonia reported occurrences of mudflats and sandflats. Most of the submitted data is based on modelling and/or GIS analysis. Data coverage, accuracy and the methods in obtaining the data vary between countries.

Estuaries (according to Habitats Directive Annex I) are coastal inlets that are strongly influenced by freshwater. The distribution map is based on data submission by HELCOM contracting parties. Most of the submitted data is based on modelling, GIS analysis and/or aerial photos. Data coverage, accuracy and the methods in obtaining the data vary between countries.

Large shallow inlets bays (according to Habitats Directive Annex I) are large, shallow indentations of the coast, sheltered from wave action and where, in contrast to estuaries, the influence of freshwater is generally limited. The distribution map is based on data submission by HELCOM contracting parties. Most of the submitted data is based on GIS analysis and modelling, but also field inventories and ground-truthing has been carried out in some areas. Data coverage, accuracy and the methods in obtaining the data vary between countries.

Raster grid of the Baltic Sea bathymetry computed with ArcGIS Spatial Analyst (KRIGING) from the original Digital Topography of the Baltic Sea (IOWTOPO) database produced by the Baltic Sea Research Institute of Warnemunde. Output resolution of the grid is 250 m, data is projected into ERTS89_LAEA CRS (Lambert Azimuthal Equal Area projection, ETRS89 datum), file format is Erdas Imagine (IMG), data format is continuous, float.