This dataset represents the integrated assessment of hazardous substances in the Baltic Sea in 2016-2021. This dataset displays the result of the assessment in HELCOM Assessment unit Level 3 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and offshore areas).

This dataset represents the underlying data on core indicator Diatom/Dinoflagellate ration 2018. The core indicator evaluates phytoplankton community structure to determine whether it reflects good environmental status. Quantitative thresholds are used to evaluate if core indicators status is Good, Not good or Not assessed. Attribute information: "Station" = Name of station "Date" = Sampling date and time "Assessment" = Name of HELCOM level 2 assessment unit "Biomass_of" = Biomass of all diatoms "Biomass_1" = Biomass of all dinoflagellates (autotrophic and mixotrophic) "Data_origi" = Data originating organization "Use_restri" = Data use restrictions (YES/NO). Restricted data is not included.

This core indicator evaluates the eutrophication status of the Baltic Sea area based on oxygen debt. The oxygen debt value is calculated based on data reported to HELCOM COMBINE database using script developed in TARGREV project and further developed within EUTRO OPER project. The R-script for calculating oxygen is accessible from https://github.com/ices-tools-prod/HEAT/tree/master/scripts/OxygenDebt This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 open sea sub-basins and division of coastal areas to WFD water types or water bodies), but applicable only to certain open sea assessment units. Coastal areas were excluded from the shapefile. Attribute information: "HELCOM_ID" = Code of the HELCOM scale 4 assessment unit "Country" = country/ opensea "level_2" = name of subbasin "level_4" = Name of the HELCOM scale 4 assessment unit "Area (km2)" = Area of the HELCOM scale 2 assessment unit “Name_1” = "Name" = Name of the open sea area “Season” = Season of the indicator “Period” = Assessment unit period (20112016 = 2011 – 2016) "Indicator value (ES)" = Indicator value calculated for the assessment unit "Standard deviation (STD)" = Standard deviation of data used for calculating ES "Number of samples " = Number of samples in assessment unit "Thershold value (ET)" = Commonly agreed thershold value "Ratio between ES and ET (ER)" = Ratio between ES and ET (in case of indicator with positive response to eutrophication) "ES_SCORE” = Confidence based on the data used for calculating ES "ET_SCORE” = Confidence of target-setting procedure "I_SCORE” = Confidence (%) = average of ES-Score and ET-Score "Indicator Weight" = Indicator Weight in integrated eutrophication assessment “Status” = Status of the indicator (“Achieve”, “Fail”, “Not assessed” or "Not applicable") “Confidence” = Confidence of result based on I-SCORE (“High”, “Moderate” or “Low”) "AULEVEL" = Assessment unit level used for the indicator

This dataset represents the underlying data on core indicator Population trends and abundance of seals 2018. This dataset contains reported observations for grey seal species. The core indicator evaluates seal distribution to determine whether it reflects good status. Quantitative thresholds are used to evaluate if core indicators status is Good, Not good or Not assessed. Attribute information: "Species" = Species (GS = Grey seal) "Country" = Country (2 digit acronym) "Site" = Name of site "Area" = Area "HELCOM_SUB" = Name of HELCOM Level 2 assessment unit "Latitude" = Latitude (WGS84 decimal degrees) of site "Longitude" = Longitude (WGS84 decimal degrees) of site "N2000_ID" = Natura2000 ID, if the site is located within Natura 2000 site (if available) "Year" = Year of observation "Month" = Month of observation "Day" = Day of observation (if available) "Count" = Number of individuals observed on site "Count_type" = Count type "Age" = Age of individuals (if available) "No_surveys" = Number of surveys "Method" = Method of survey "CV_Estimate" "Estimate_T" = Estimate type: Modelled / minimum (observed) "Source" = Data source

The assessment results for waterbirds for the HELCOM Third Holistic Assessment of the Ecosystem Health of the Baltic Sea (HOLAS 3) contains the following datasets: Integrated Biodiversity Status Assessment for Waterbirds, Integrated Biodiversity Status Assessment for surface-feeding birds, Integrated Biodiversity Status Assessment for pelagic-feeding birds, Integrated Biodiversity Status Assessment for benthic-feeding birds, Integrated Biodiversity Status Assessment for wading birds, and Integrated Biodiversity Status Assessment for grazing birds. Status is shown in five categories based on the integrated assessment scores obtained in the tool. Biological Quality Ratios (BQR) above 0.6 correspond to good status. The datasets were created using the BEAT tool. https://github.com/helcomsecretariat/BEAT Attribute information: "Birds_ag" = Birds group area "GroupName" = Birds group area name "BQR" = Biological Quality Ratio "Conf" = Confidence of the assessment (0-1, higher values mean higher confidence) "ConfClass" = Confidence class "Status" = Integrated status category (0-0.2 = not good (lowest score), 0.2-0.4 = not good (lower score), 0.4-0.6 = not good (low score), 0.6-0.8 = good (high score), 0.8-1.0 = good (highest score)) "ProportionSpecies" = Proportion of species in good status "SAUlevel" = Spatial assessment unit ID in which the assessment status took place "EcosystemComponent" = Ecosystem component assessed

This dataset contains the integrated status assessment for seals (grey seals, harbour seals and ringed seals), harbour porpoise and waterbirds (surface-feeding birds, pelagic-feeding birds, benthic-feeding birds, wading birds, and grazing birds) with bycatch for the HELCOM Third Holistic Assessment of the Ecosystem Health of the Baltic Sea (HOLAS 3). Status is shown in five categories based on the integrated assessment scores obtained in the tool. Biological Quality Ratios (BQR) above 0.6 correspond to good status. The datasets were created using the BEAT tool. https://github.com/helcomsecretariat/BEAT Attribute information for mammals: "level_2" = HELCOM sub-basins (name of the scale 2 assessment unit) "HELCOM_ID" = id of the HELCOM assessment unit "SAUID" = ID number for the spatial assessment unit "SAULEVEL" = spatial assessment unit ID in which the assessment status took place "SAU" = Name the spatial assessment unit "ECID" = Ecosystem component id "EClevel" = Ecosystem component assessed level "EcosystemC" = Ecosystem component assessed "Status" = Integrated status category (0-0.2 = not good (lowest score), 0.2-0.4 = not good (lower score), 0.4-0.6 = not good (low score), 0.6-0.8 = good (high score), 0.8-1.0 = good (highest score)) "Conf" = Confidence of the assessment (0-1, higher values mean higher confidence) "ConfClass" = Confidence class "BQR" = Biological Quality Ratio "Status_EQR" = Status of the Biological Quality Ratio Attribute information for waterbirds: "Birds_ag" = Birds group area "GroupName" = Birds group area name "level_2" = Name of the HELCOM assessment unit in scale 2 "HELCOM_ID" = Code of the HELCOM scale 2 assessment unit "BQR" = Biological Quality Ratio "Conf" = Confidence of the assessment (0-1, higher values mean higher confidence) "ConfClass" = Confidence class

This dataset represents the underlying data on core indicator Hexabromocyclododecane (HBCDD). The core indicator evaluates the status of the marine environment based on concentrations of Hexabromocyclododecane (HBCDD) in sediment. Quantitative threshold values are used to evaluate if core indicators status is Achieve, Fail or Not assessed. The threshold value is an environmental quality standard (EQS), derived at EU level as a substance included on the priority list under Directive 2008/105/EC. This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and off-shore areas and division of the coastal areas by WFD water types or water bodies) Attribute information: "region" = name of region "country" = country "station" = Unique code for station "stationNam" = name for the station "determinan" = determinant parameter "detGroup" = the grouping of determinants used to display the results "_shape" = shape used to map assessment results "colour" = colour used to map assessment results "l3area" = HELCOM assessment unit on scale 3 "l4area" = HELCOM assessment unit on scale 4 "nyall" = total number of years of data "nyfit" = number of years of data used in the assessment "nypos" = number of years with at least one measurement above the limit of detection "lastyear" = most recent year of data "prtrend" = the significance of the change over the most recent 20 years; for the assessment conducted in November 2017 and published in June 2018, this is the period 1996-2016 "rtrend" = annual ‘linear’ change over the most recent 20 years "meanLY" = fitted value in last monitoring year "clLY" = upper one-sided 95% confidence limit on fitted value in last monitoring year "EQS" = Threshold value "EQSdiff" = difference between clLY and EQS "EQSbelow" = whether the mean value in the last monitoring year is significantly below EQS

This dataset represents the underlying water data on core indicator TBT and imposex. The core indicator evaluates the status of the marine environment based on concentrations of the tributyltin (TBT) and its breakdown products dibutyltin (DBT) and monobutyltin (MBT) in the Baltic Sea; in water, biota (mussels, marine gastropods) and sediments. Imposex effects of TBT on marine gastropods are used as another source of data on TBT. Quantitative thresholds are used to evaluate if core indicators status is Achieve, Fail or Not assessed. Good status is achieved when the concentrations of TBT are below the threshold value. This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and off-shore areas and division of the coastal areas by WFD water types or water bodies). Attribute information: "region" = MIME subregion "country" = country "station" = Unique text that identifies the station "stationNam" = name for the station "determinan" = determinant parameter (TBTIN = tributyltin) "detGroup" = the grouping of determinands used to display the results "filtered" = Filtered or unfiltered water sample used in analysis "_shape" = shape used to map assessment results "colour" = colour used to map assessment results "l3area" = HELCOM assessment unit on scale 3 "l4area" = HELCOM assessment unit on scale 4 "nyall" = total number of years of data "nyfit" = number of years of data used in the assessment "nypos" = number of years with at least one measurement above the limit of detection "lastyear" = most recent year of data "prtrend" = the significance of the change over the most recent 20 years; for the assessment conducted in November 2017 and published in June 2018, this is the period 1996-2016 "rtrend" = annual ‘linear’ change over the most recent 20 years "meanLY" = fitted value in last monitoring year "clLY" = upper one-sided 95% confidence limit on fitted value in last monitoring year "EQS" = Threshold value "EQSdiff" = difference between clLY and EQS "EQSbelow" = whether the mean value in the last monitoring year is significantly below EQS

This pre-core indicator evaluates the eutrophication status of the Baltic Sea area based on cyanobacterial bloom index. The index is calculated using two types of data: biomass data and Earth observation data. More detailed description on methodology can be found at HELCOM pre-core indicator report and http://www.helcom.fi/Documents/Eutrophication%20assessment%20manual.pdf This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 open sea sub-basins and division of coastal areas to WFD water types or water bodies), but applicable only to certain open sea assessment units. Attribute information: "HELCOM_ID" = Code of the HELCOM scale 4 assessment unit "Country" = country/ opensea "level_2" = name of the subbasin "level_4" = Name of the HELCOM scale 4 assessment unit "Area (km2)" = Area of the HELCOM scale 2 assessment unit “Season” = Season of the indicator (Summer = June-September) “Period” = Assessment unit period start and end year (20112016 = 2011 – 2016) "Indicator value (ES)" = Indicator value calculated for the assessment unit "Standard deviation (STD)" = Standard deviation of data used for calculating ES "Number of samples " = Number of samples (not applicable for cyanobacterial bloom index) "Threshold value (ET)" = Commonly agreed threshold value "Ratio between ES and ET (ER)" = Ratio between ES and ET (in case of indicator with positive response to eutrophication) "ES_SCORE” = Confidence based on the data used for calculating ES "ET_SCORE” = Confidence of target-setting procedure "I_SCORE” = Confidence (%) = average of ES-Score and ET-Score "Indicator Weight" = Indicator Weight in integrated eutrophication assessment “Status” = Status of the indicator (“Achieve”, “Fail”, “Not assessed” or "Not applicable") "AULEVEL" = Assessment unit level used for the indicator "FID_12" = "Indicator" = Indicator name “CONFIDENCE” = Confidence of result based on I-SCORE (“High”, “Moderate”, “Low” or "Not assessed")

This dataset represents the underlying water data on core indicator Heavy metals – Cadmium. The core indicator evaluates the status of the marine environment based on concentrations of heavy metal cadmium (Cd) in seawater, mussels and sediments. Quantitative thresholds are used to evaluate if core indicators status is Achieve, Fail or Not assessed. Threshold values are based on Environmental quality standards (EQS), defined at EU level for substances included in the priority list under the Water Framework Directive. Attribute information: "region" =name of subbasin "country" = country "station" = Unique code for the station "stationNam" = name for the station "determinan" = determinant parameter (CD = Cadmium) "detGroup" = the grouping of determinands used to display the results "filtered" = Filtered or unfiltered water sample used in analysis "_shape2 = shape used to map assessment results "colour" = colour used to map assessment results "l3area" = HELCOM assessment unit on scale 3 "l4area" = HELCOM assessment unit on scale 4 "nyall" = total number of years of data "nyfit" = number of years of data used in the assessment "nypos" = number of years with at least one measurement above the limit of detection "lastyear" = most recent year of data "prtrend" = the significance of the change over the most recent 20 years; for the assessment conducted in November 2017 and published in June 2018, this is the period 1996-2016 "rtrend" = annual ‘linear’ change over the most recent 20 years "meanLY" = fitted value in last monitoring year "clLY" = upper one-sided 95% confidence limit on fitted value in last monitoring year "EQS" = Threshold value "EQSdiff" = difference between clLY and EQS "EQSbelow" = whether the mean value in the last monitoring year is significantly below EQS