This dataset contains datasets for the Eutrophication assessment developed under the HELCOM Third Holistic Assessment of the Ecosystem Health of the Baltic Sea (HOLAS 3). The dataset contains all Baltic Sea monitoring CTD data reported by HELCOM Contracting Parties to ICES for the HOLAS3 assessment period 2016-2021. The data have been reported using the ICES Ocean reporting format: https://www.ices.dk/data/data-portals/Pages/ocean-format.aspx https://www.ices.dk/data/Documents/ocean/ICES-Oceanography-Data-Submission-Format.zip

Springtime Chl-a concentration is here used as a proxy for productive surface waters. In the Baltic Sea Spatial Pressure and Impact Index (SPIA), areas with high springtime phytoplankton production will be given higher importance, as they are considered important areas for the Baltic Sea food web. In the current map, mean of springtime maximum weekly values (weeks 12-22 for the HOLAS3 assessment period 2016-2021). Satellite Chl-a concentration of the surface waters has been used and converted to index by Finnish Environment institute with resolution of 1 km x 1 km grid cells.

This indicator evaluates the eutrophication status of the Baltic Sea area based on dissolved inorganic phosphorus (DIP) concentration. The measured average DIP is based on in-situ PO4 measurements from oceanographic monitoring data for winter period (December-February) 2011-2016 (umol/l), surface water (0-10 m). More detailed description on methodology can be found at http://www.helcom.fi/baltic-sea-trends/indicators/Dissolved-inorganic-phosphorus-(DIP) and http://www.helcom.fi/Documents/Eutrophication%20assessment%20manual.pdf This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 open sea sub-basins and division of coastal areas to WFD water types or water bodies). The open sea areas have been assessed based on HELCOM Monitoring data and results for coastal areas are based on national WFD results. Attribute information: "HELCOM_ID" = Code of the HELCOM scale 4 assessment unit "Country" = country "level_2" = name of subbasin "name" = Name of the HELCOM scale 4 assessment unit "Area (km2)" = Area of the HELCOM scale 2 assessment unit "Indicator" = Name of indicator “Season” = Season of the indicator (Winter = December-February) “Period” = Assessment unit period (20112016 = 2011 – 2016) Indicator value (ES) = Indicator value calculated for the assessment unit "Standard deviation (STD)" = Standard deviation of data used for calculating ES "Number of samples " = Number of samples in assessment unit "Thershold value (ET)" = Commonly agreed thershold value "Ratio between ES and ET (ER)" = Ratio between ES and ET (in case of indicator with positive response to eutrophication) "ES_SCORE” = Confidence based on the data used for calculating ES "ET_SCORE” = Confidence of target-setting procedure "I_SCORE” = Confidence (%) = average of ES-Score and ET-Score "Indicator Weight" = Indicator Weight in integrated eutrophication assessment “Status” = Status of the indicator (“Achieve”, “Fail”, “Not assessed” or "Not applicable") “Confidence” = Confidence of result based on I-SCORE (“High”, “Moderate”, “Low” or "Not assessed") "AULEVEL" = Assessment unit level used for the indicator

This dataset contains pre-core indicator data developed under the HELCOM Third Holistic Assessment of the Ecosystem Health of the Baltic Sea (HOLAS 3).

This core indicator evaluates the status of the white-tailed eagle by assessing breeding success, brood size and productivity. Quantitative thresholds are used to evaluate if core indicator Achieves or Fails Good status or if the status is Not assessed. Note that in some areas the indicator is applicable but not assessed, while it is not applicable in others. This dataset displays the result of the indicator in HELCOM Assessment Scale 3 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and offshore areas). Attribute information: "HELCOM_ID" = Code of the HELCOM scale 3 assessment unit "Country" = country/ opensea "Area (km2) = Area of HELCOM assessment unit "level_3" = Code of scale 3 HELCOM assessment unit "AULEVEL" = Assessment unit level used for the indicator "Area" = description of the assessment unit "Breeding Success" = Results for Breeding Success "Breeding Success Status" = Status of the indicator for Breeding Success ("GES" = Good Environmental Status, "subGES" = Good Environmental status not achieved, applicable, not applicable) "BroodSize" = Results for Brood Size "Brood Size Status" = Status of the indicator for Brood Size ("GES" = Good Environmental Status, "subGES" = Good Environmental status not achieved, applicable, not applicable) "Productivity" = Results for Productivity "Productivity Status" = Status of the indicator for Productivity ("GES" = Good Environmental Status, "subGES" = Good Environmental status not achieved, applicable, not applicable) "Overall status" = Overall Status of the indicator according to one-out-all-out (“Achieve”, “Fail”, “Applicable” or “Not applicable”)

This core indicator evaluates the status of abundance of wintering waterbirds in the Baltic Sea region, here visualized for benthic feeders. The wintering waterbirds are considered to reflect good status when at least 75% of the considered species deviate less than 30% downwards (species laying more than one egg per year) or 20% downwards (species laying one egg per year) from the baseline condition during the reference period 1991-2000. This dataset displays the result of the indicator in HELCOM Assessment Scale 3 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and offshore areas). Attribute information: "HELCOM_ID" = ID of the HELCOM scale 3 assessment unit "country" = Country "Group area" = Name of the group area "level_2" = Name of scale 2 HELCOM assessment unit (subbasin) "level_3" = Name of scale 3 HELCOM assessment unit "Area (km2)" = Area of HELCOM assessment unit "coastal" = HELCOM ID of the coastal areas "open_sea" = Open sea assessment unit name "Abundance" = Assessed parameter "Threshold" = Threshold value "Wading feeders" = Results for the category "Wading feeders status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "Surface feeders" = Results for the category "Surface feeders status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "Pelagic feeders" = Results for the category "Pelagic feeders status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "Benthic feeders" = Results for the category "Benthic feeders status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "Grazing feeders" = Results for the category "Grazing feeders status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "AULEVEL" = Assessment unit level used for the indicator

This dataset represents the Integrated biodiversity status assessment for benthic habitats using the BEAT tool. Status is shown in five categories based on the integrated assessment scores obtained in the tool. Biological Quality Ratios (BQR) above 0.6 correspond to good status. The assessment in open sea areas was based on the core indicators ‘State of the soft-bottom macrofauna community’ and ‘Oxygen debt’. Coastal areas were assessed by national indicators, and may hence not be directly comparable with each other. This dataset displays the result of the integrated biodiverity status in HELCOM Assessment unit Scale 4 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and off-shore areas and division of the coastal areas by WFD water types or water bodies). Attribute information: "BQR" = Biological Quality Ratio "Confidence" = Confidence of the assessment "HELCOM_ID" = id of the HELCOM assessment unit "country" = name of the country / opensea "level_2" = HELCOM sub-basins (name of the scale 2 assessment unit) "Name" = Name of the coastal assessment unit on scale 4 "AULEVEL" = scale of the assessment units "type_descr" = Name of the HELCOM scale 4 assessment unit "SAUID" = ID number for the spatial assessment unit "EcosystemC" = Ecosystem component assessed "Confiden_1" = Confidence of the assessment (0-1, higher values mean higher confidence) "Total_numb" = Number of indicators used in assessment "Area_km2" = Area of assessment unit (km2) "Confiden_1" = Confidence level of the assessment (scores < 0.5 = low, 0.5 - 0.75 = intermediate, > 0.75 = high) "STATUS" = Integrated status category (0-0.2 = not good (lowest score), 0.2-0.4 = not good (lower score), 0.4-0.6 = not good (low score), 0.6-0.8 = good (high score), 0.8-1.0 = good (highest score))

This core indicator evaluates the eutrophication status of the Baltic Sea area based on oxygen debt. The oxygen debt value is calculated based on data reported to HELCOM COMBINE database using script developed in TARGREV project and further developed within EUTRO OPER project. The R-script for calculating oxygen is accessible from https://github.com/ices-tools-prod/HEAT/tree/master/scripts/OxygenDebt This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 open sea sub-basins and division of coastal areas to WFD water types or water bodies), but applicable only to certain open sea assessment units. Coastal areas were excluded from the shapefile. Attribute information: "HELCOM_ID" = Code of the HELCOM scale 4 assessment unit "Country" = country/ opensea "level_2" = name of subbasin "level_4" = Name of the HELCOM scale 4 assessment unit "Area (km2)" = Area of the HELCOM scale 2 assessment unit “Name_1” = "Name" = Name of the open sea area “Season” = Season of the indicator “Period” = Assessment unit period (20112016 = 2011 – 2016) "Indicator value (ES)" = Indicator value calculated for the assessment unit "Standard deviation (STD)" = Standard deviation of data used for calculating ES "Number of samples " = Number of samples in assessment unit "Thershold value (ET)" = Commonly agreed thershold value "Ratio between ES and ET (ER)" = Ratio between ES and ET (in case of indicator with positive response to eutrophication) "ES_SCORE” = Confidence based on the data used for calculating ES "ET_SCORE” = Confidence of target-setting procedure "I_SCORE” = Confidence (%) = average of ES-Score and ET-Score "Indicator Weight" = Indicator Weight in integrated eutrophication assessment “Status” = Status of the indicator (“Achieve”, “Fail”, “Not assessed” or "Not applicable") “Confidence” = Confidence of result based on I-SCORE (“High”, “Moderate” or “Low”) "AULEVEL" = Assessment unit level used for the indicator

This dataset represents the underlying water data on core indicator Perfluorooctane sulphonate (PFOS). The core indicator evaluates the status of the marine environment based on concentrations of perfluorooctane sulphonate (PFOS) in Baltic Sea fish and in a few assessment unit using the secondary matrix seawater. Quantitative thresholds are used to evaluate if core indicators status is Achieve, Fail or Not assessed. Good status is achieved when the concentrations of PFOS are below the threshold value. This dataset displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and off-shore areas and division of the coastal areas by WFD water types or water bodies). Attribute information: "region" = name of subbasin "country" = country "station" = Unique code for the station "stationNam" = name for the station "determinan" = determinant parameter "detGroup" = the grouping of determinands used to display the results "filtered" = Filtered or unfiltered water sample used in analysis "_shape" = shape used to map assessment results "colour" = colour used to map assessment results "l3area" = HELCOM assessment unit on scale 3 "l4area" = HELCOM assessment unit on scale 4 "nyall" = total number of years of data "nyfit" = number of years of data used in the assessment "nypos" = number of years with at least one measurement above the limit of detection "lastyear" = most recent year of data "prtrend" = the significance of the change over the most recent 20 years; for the assessment conducted in November 2017 and published in June 2018, this is the period 1996-2016 "rtrend" = annual ‘linear’ change over the most recent 20 years "meanLY" = fitted value in last monitoring year "clLY" = upper one-sided 95% confidence limit on fitted value in last monitoring year "EQS" = Threshold value "EQSdiff" = difference between clLY and EQS "EQSbelow" = whether the mean value in the last monitoring year is significantly below EQS

This core indicator evaluates the status of abundance of wintering waterbirds in the Baltic Sea region. The wintering waterbirds are considered to reflect good status when at least 75% of the considered species deviate less than 30% downwards (species laying more than one egg per year) or 20% downwards (species laying one egg per year) from the baseline condition during the reference period 1991-2000. This dataset displays the result of the indicator in HELCOM Assessment Scale 1 (Whole Baltic Sea). Attribute information: "level_1" = Name of scale 1 HELCOM assessment unit "AULEVEL" = Assessment unit level used for the indicator "Status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "Eurasian Teal" = Results for Eurasian teal "Black-headed Gull" = Results for black-headed gull "Common Gull" = Results for common gull "Great Black-backed Gull" = Results for great black-backed gull "Herring Gull" = Results for herring gull "Smew" = Results for smew "Goosander" = Results for goosander "Red-breasted Merganser" = Results for red-breasted merganser "Great Crested Grebe" = Results for great crested grebe "Great Cormorant" = Results for great cormorant "Common Pochard" = Results for common pochard "Tufted Duck" = Results for tufted duck "Greater Scaup" = Results for greater scaup "Steller's Eider" = Results for Steller's eider "Common Goldeneye" = Results for common goldeneye "Mute Swan" = Results for mute swan "Whooper Swan" = Results for whooper swan "Bewick's Swan" = Results for Bewick's swan "Mallard" = Results for mallard "Northern Pintail" = Results for northern pintail "Eurasian Coot" = Results for Eurasian coot "Eurasian Wigeon" = Results for Eurasian wigeon