Physical loss pressure layer combines all human activities that cause physical loss of seabed. The pressure is given as area lost in each cell (km2). For the polygon datasets the area was assumed to be the lost area. For line and point datasets spatial extents were calculated with buffers (below in brackets). If no buffer extent is indicated, the data was reported as polygon. The human activities used for the physical loss pressure: Land claim - Area of polygon or 50 m buffer for points, 30m buffer for lines. Area of polygon - buffered line or point data, equals lost area. Watercourse modification - 50 m buffer. Area of polygon, buffered line or point data, equals lost area. Coastal defence and flood protection - 50 m buffer for lines, area of polygon. Area of polygon, buffered line or point data, equals lost area. Extraction of sand and gravel - Area of polygon. Area of polygon equals lost area. Dredging (capital) - Area of polygon or a 25/50 m buffer for <5000 m3 / >5000m3 sites. Area of polygon, buffered line or point data, equals lost area. Oil platforms - 25 m buffer. Buffered point data, equals lost area. Pipelines - 15 m buffer around cables with operational status. Area of polygon, buffered line or point data, equals lost area. Wind farms - 30 m buffer around each turbine with operational status. Buffered point data, equals lost area. Cables - 1.5 m buffer around cables with operational status. Buffered line data, equals lost area. Harbours - Polygon with 200 m buffer. Area of polygon, buffered line or point data, equals lost area. Marinas and leisure harbour - Point with 200 m buffer. Buffered point data, equals lost area. Bridges - 2 m buffer. Buffered line data, equals lost area. Finfish mariculture - 150 m buffer. Buffered point data, equals lost area. Shellfish mariculture - Area of polygon, 150 m buffer for points. Buffered point data, equals lost area. Activities are combined and potentially overlapping areas are removed. Dataset is clipped with coastline. Combined layer is intersected with 1 km grid to calculate % of area lost within a cell.

This dataset represents the underlying data on core indicator Abundance of coastal fish key functional groups. The core indicator evaluates the abundance of selected functional groups of coastal fish in the Baltic Sea. Quantitative thresholds are used to evaluate if core indicators status is Good, Not good or Not assessed. As a rule, good status is achieved when the abundance of piscivores (i.e. fish that feed on other fish) is above a site-specific threshold value, and the abundance of cyprinids or mesopredators (i.e. mid trophic-level fish) is within an acceptable range for the specific site. The status of functional groups of coastal fish in the Baltic Sea has been evaluated by assessing the status of piscivores and cyprinids/mesopredators during the period 2011-2016. This dataset displays the result of the indicator in HELCOM Assessment Scale 3 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and offshore areas). Attribute information: "COUNTRYID" = Country code "ORGANIZATI" = Data provider "AREANAME" = ICES area name "ASSESSMENT" = Name of scale 3 HELCOM assessment unit "IndicatorI" = Indicator name (abbreviation) "Functional" = Functional group "IndicatorV" = Result value for the indicator "MethodId" = Catch method "GearType_N" = Gear type of catch "Season_NAM" = Season

This dataset represents the underlying water data on core indicator Heavy metals – Lead.The core indicator evaluates the status of the marine environment based on concentrations of heavy metal Lead (Pb) in water, fish liver and sediments. Quantitative thresholds are used to evaluate if core indicators status is Achieve, Fail or Not assessed. Threshold values are based on Environmental quality standards (EQS), defined at EU level for substances included in the priority list under the Water Framework Directive. The Core indicator displays the result of the indicator in HELCOM Assessment Scale 4 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and off-shore areas and division of the coastal areas by WFD water types or water bodies). Attribute information: "region" = MIME subregion "country" = country "station" = Unique text that identifies the station "stationNam" = name for the station "determinan" = determinant parameter (PB = Lead) "detGroup" = the grouping of determinands used to display the results "filtered" = Filtered or unfiltered water sample used in analysis "_shape" = shape used to map assessment results "colour" = colour used to map assessment results "l3area" = HELCOM assessment unit on scale 3 "l4area" = HELCOM assessment unit on scale 4 "nyall" = total number of years of data "nyfit" = number of years of data used in the assessment "nypos" = number of years with at least one measurement above the limit of detection "lastyear" = most recent year of data "prtrend" = the significance of the change over the most recent 20 years; for the assessment conducted in November 2017 and published in June 2018, this is the period 1996-2016 "rtrend" = annual ‘linear’ change over the most recent 20 years "meanLY" = fitted value in last monitoring year "clLY" = upper one-sided 95% confidence limit on fitted value in last monitoring year "EQS" = Threshold value "EQSdiff" = difference between clLY and EQS "EQSbelow" = whether the mean value in the last monitoring year is significantly below EQS

This dataset contains all heavy dioxins in biota monitoring station locations, observed matrix, biota matrix and monitored species as reported to HELCOM secretariat by HELCOM Contracting Parties by 2016.

This dataset contains the in-situ monitoring data used for calculating eutrophication indicator results for following indicators: Chlorophyll-a 2018 Dissolved inorganic nitrogen 2018 Dissolved inorganic phosphorus 2018 Total nitrogen 2018 Total phosphorus 2018 Water clarity 2018 This dataset is extraction for 2011-2016 assessment period from HELCOM COMBINE database, which contains all HELCOM oceanographic monitoring data. Full COMBINE database can be accessed from dedicated web page Attribute information: "Cruise": Platform code of the monitoring cruise, which can be queried from http://vocab.ices.dk/ "Station": Station number "Year": Year of sampling event "Month": Month of sampling event "Day": Day of sampling event "Hour": Hour of sampling event "Minute": Minute of sampling event "Latitude": Latitude coordinate of the sampling location (WGS84 decimal degrees) "Longitude": Longitude coordinate of the sampling location (WGS84 decimal degrees) "BotDepth": Bottom depth (m) of sampling location "Secchi": Secchi depth at sampling location "StationNam": Station name from ICES Station dictionary "Assessment" = HELCOM assessment unit ID "Depth": Sampling depth (m) "Temperature": Temperature (ºC) "Salinity": Salinity "Oxygen": Oxygen (ml/l) "Phosphate": Phosphate (umol/l) "TotalPhos": Total phosphorus (umol/l) "Silicate": Silicate (umol/l) "Nitrate": Nitrate (umol/l) "Nitrite": Nitrite (umol/l) "Ammonium": Ammonium (umol/l) "TotalNitr": Total nitrogen (umol/l) "HydrogenS": Hydrogen sulphide (umol/l) "pH": pH "Alkalinity": Alkalinity (mEq/l) "Chlorophyl": Chlorophyll-a (ug/l)

This dataset contains all HBCD in biota monitoring station locations, observed matrix, biota matrix and monitored species as reported to HELCOM secretariat by HELCOM Contracting Parties by 2016.

This core indicator evaluates the abundance of selected functional groups of coastal fish in the Baltic Sea. Quantitative thresholds are used to classify core indicators status in "Achieve", "Fail" or "Not assessed". As a rule, good status is achieved when the abundance of piscivores (i.e. fish that feed on other fish) is above a site-specific threshold value, and the abundance of cyprinids or mesopredators (i.e. mid trophic-level fish) is within an acceptable range for the specific site. The status of functional groups of coastal fish in the Baltic Sea has been evaluated by assessing the status of piscivores and cyprinids/mesopredators during the period 2011-2016. This dataset displays the result of the indicator for piscivores in HELCOM Assessment Scale 3 (Division of the Baltic Sea into 17 sub-basins and further division into coastal and offshore areas). Attribute information: "HELCOM_ID" = HELCOM ID of the HELCOM scale 3 assessment unit "Country" = Country/ Open sea "level_2" = Name of scale 2 HELCOM assessment unit "Name" = "level_3" = Name of scale 3 HELCOM assessment unit "Area (km2)" = Area of the HELCOM scale 3 assessment unit "Coastal" = Code of scale 3 HELCOM assessment unit  "Open sea" = Name of the open sea area "Coast_Code" = Code of scale 3 HELCOM assessment unit "Subbasin code" = Code of the HELCOM subbasin (scale 3) "Indicator" = Name of the indicator "Unit" = Unit of the indicator "Type" = 1 = boundary values increase/decrease monotonically, 2 = optimum range indicator "Threshold" = Threshold value of indicator "Indicator value" = Result value for the indicator "Status" = Status of the indicator (“Achieve”, “Fail” or “Not assessed”) "AULEVEL" = Assessment unit level used for the indicator "ConfA" = Confidence of classification "ConfT" = Temporal confidence of classification "ConfS" = Spatial confidence of classification "ConfM" = Methodological confidence of classification

Observations of Enchelyopus cimbrius were collected from the Baltic Sea area for HELCOM Red List species list. The HELCOM Red List of Baltic Sea species in danger of becoming extinct (2013) is the first threat assessment for Baltic Sea species that covers all marine mammals, fish, birds, macrophytes (aquatic plants), and benthic invertebrates, and follows the Red List criteria of the International Union for Conservation of Nature (IUCN). Almost 2800 species were considered in the Red List assessment and about 1750 were evaluated according to the IUCN Red List criteria. Enchelyopus cimbrius has been placed to the Red List category of Near Threatened (NT) species. The map shows the sub-basins in the HELCOM area where the species is known to occur regularly and to reproduce (HELCOM 2012a).

The assessment results for waterbirds for the HELCOM Third Holistic Assessment of the Ecosystem Health of the Baltic Sea (HOLAS 3) contains the following datasets: Overall seal integrated result map, Grey seal integrated result map, Ringed seal integrated result map, Harbour seal integrated result map, and Harbour porpoise integrated result map. Status is shown in five categories based on the integrated assessment scores obtained in the tool. Biological Quality Ratios (BQR) above 0.6 correspond to good status. The datasets were created using the BEAT tool. https://github.com/helcomsecretariat/BEAT Attribute information: "Mammals_ag" = Aggregated area "SAULEVEL" = spatial assessment unit ID in which the assessment status took place "ECID" = Ecosystem component ID "EClevel" = Ecosystem Component level "EcosystemComponent" = Ecosystem component assessed "BQR" = Biological Quality Ratio "Conf" = Confidence of the assessment (0-1, higher values mean higher confidence) "ConfClass" = Confidence class

Observations of Mya truncata were collected from the Baltic Sea area for HELCOM Red List species list. The HELCOM Red List of Baltic Sea species in danger of becoming extinct (2013) is the first threat assessment for Baltic Sea species that covers all marine mammals, fish, birds, macrophytes (aquatic plants), and benthic invertebrates, and follows the Red List criteria of the International Union for Conservation of Nature (IUCN). Almost 2800 species were considered in the Red List assessment and about 1750 were evaluated according to the IUCN Red List criteria. Mya truncata has been placed to the Red List category of Near Threatened (NT) species. Dataset for download contains spatial grid of the Baltic Sea. Distribution of the species can be found in corresponding name column. Values are coded: 1 - Present before year 2000 or in 2000, 2 - Present after year 2000, 3 - Present both before and after year 2000.