Distribution of Furcellaria lumbricalis based on data submission by HELCOM contracting parties. Mainly pointwise occurrences of Furcellaria were submitted, originally gathered in national mapping and monitoring campaigns, or for scientific research purposes. From Estonian waters, a predictive model was used (200m resolution), that was converted to presence/absence using minimized difference threshold (MDT) criteria. For Poland, only confirmed occurrence of Furcellaria were included (Slupsk bansk, Rowy reef and reef at Orlowo cliff). All data (Furcellaria points and the raster presenting predicted presence of Furcellaria) were generalized to 5km x 5km grid cells.

Broad-scale habitat maps for the Baltic Sea have been produced in the EUSeaMap project in 2016. For German and Estonian marine areas, national (more accurate) datasets were used. German data included both substrate and light information (division into infralittoral/circalittoral). Estonian data included only substrate and the division into light regimes was obtained from the EuSeaMap data. Here, the habitat class “circalittoral mud” includes classes “Fine mud”, “Sandy mud” and “Mud to sandy mud” of the original data, in the circalittoral zone. The original polygon maps have been converted to 1 km x 1 km grid. The scale of the substrate data used in broad-scale habitat maps varies from 1:250 000 to 1:1M (data from EMODnet Geology). Coarser resolution data has been used in areas, where 1: 250 000 substrate data has not been available. Due to different scales used, the habitat classes may show different sized patterns in different areas.

Estuaries (according to Habitats Directive Annex I) are coastal inlets that are strongly influenced by freshwater. The distribution map is based on data submission by HELCOM contracting parties. Most of the submitted data is based on modelling, GIS analysis and/or aerial photos. Data coverage, accuracy and the methods in obtaining the data vary between countries.

This dataset contains modelled small vessel fuel consumption. This describes the geographical distribution of the fuel used by small boats. The total fuel consumption was modelled in SHEBA project to study emissions from pleasure boats. The model is based on locations and berths in marinas and leisure harbours, AIS information, statistics on fuel sale and extensive survey. For 2018 version the layer is weighted with depth, log-transformed and normalised (please see below). This dataset was also used on HOLAS 3.

Input of impulsive anthropogenic sound includes impulsive events from 2011-2016 • Seismic surveys (HELCOM-OSPAR Registry; national data call submissions as lines in the folder of data) • Explosions (HELCOM-OSPAR Registry) • Pile driving (HELCOM-OSPAR Registry) • Airguns (HELCOM-OSPAR Registry) For the different event types, numeric intensity value was used to represent the pressure as categorized in HELCOM-OSPAR Impulsive noise registry. All nationally reported seismic surveys were given intensity values “Very low” (0.25) - Very low (0.25) - Low (0.5) - Medium (0.75) - High (1) The impact distance has not been taken into account due to the different nature of separate datasets used for the pressure layer. We acknowledge that e.g. pile driving and airguns may impact up to 20 km from the source event. The spread of the sound wave depends on the sound frequency, water salinity, temperature and density.

The extraction of cod pressure layer is based on two datasets: 1. http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/7a1389b3-382a-487f-8888-ac45c94c5a97 for years 2011-2016 reported per ICES statistical rectangles (tonnes / ICES rectangle). 2. http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/debeafcd-948b-4455-88ae-7a3d1618f5a8 from ICES recreational fisheries reports for 2011-2016, reported per country (only coastal areas included). Landing values were redistributed within each ICES rectangle by the c-square fishing effort data provided by ICES (all gears, 2011-2013). Tonnes / km² were calculated for both data sets and the results were converted to 1 km x 1 km grid cells. The layers were summed together, log-transformed and normalised to produce the final pressure layer on extraction of cod. Please see "lineage" section below for further details on attributes, data source, data processing, etc.

Broad-scale habitat maps for the Baltic Sea have been produced in the EUSeaMap project in 2016. For German and Estonian marine areas, national (more accurate) datasets were used. German data included both substrate and light information (division into infralittoral/circalittoral). Estonian data included only substrate and the division into light regimes was obtained from the EuSeaMap data. Here, the habitat class “circalittoral mixed substrate” includes classes “mixed sediment” of the original data, in the circalittoral zone. The original polygon maps have been converted to 1 km x 1 km grid. The scale of the substrate data used in broad-scale habitat maps varies from 1:250 000 to 1:1M (data from EMODnet Geology). Coarser resolution data has been used in areas, where 1: 250 000 substrate data has not been available. Due to different scales used, the habitat classes may show different sized patterns in different areas.

The occurrence of suitable nursery habitats is crucial for maintaining fish populations (Sundblad et al. 2013). Species distribution modelling studies have shown the importance of suitable environmental conditions for pikeperch recruitment. Due to lack of coherent data on pikeperch spawning and nursery areas across the Baltic Sea countries, environmental variables were used in delineating potential recruitment areas for pikeperch. The pikeperch recruitment area presented on the map is mainly delineated by selecting areas where depth < 5 m, logged exposure < 5, salinity < 7 PSU, Secchi depth < 2 m and distance to deep (10m) water < 4km. The threshold values have been obtained from literature (Veneranta et al. 2011, Bergström et al. 2013, Sundblad et al. 2013, Kallasvuo et al. 2016). Temperature, although important for pikeperch, was left out due to high variation in timing of suitable spawning temperatures across the Baltic Sea. In Finnish coastal waters, a national pikeperch model (Kallasvuo et al. 2016) has been used, with very suitable areas for pikeperch generalized to 1 km grid. In Sweden, the areas delineated by environmental variables have been complemented with information from national interview survey (Gunnartz et al. 2011) as well as expert opinion.

The seals' distribution maps show the distribution and abundance of grey, harbour and ringed seals across the Baltic Sea. The ecosystem component maps on mammals' distribution were drafted by EG MAMA harbour porpoise and seal distribution teams. The maps were prepared as expert-derived distribution categories to be used in the HELCOM Third Holistic Assessment of the Ecosystem health of the Baltic Sea.

This dataset is the first dedicated SMOS Sea Surface Salinity (SSS) product for the Baltic basin to enhance the science capabilities in the Baltic region and help to fill the gaps and grand challenges identified by the scientific community. These new product has been created under the funded ESA project ITT Baltic+ Salinity dynamics (4000126102/18/I-BG). This basin is one of the most challenging regions for the satellite SSS retrieval. The available EO-based SSS products are quite limited in terms of spatio-temporal coverage and quality. This is mainly due to technical limitations that strongly affect the brightness temperatures (TB), such as the high contamination by interferences and the contamination close to land and ice edges. Moreover, the sensitivity of TB to SSS changes is very low and dielectric models present limitations in this low salinity regime. Baltic+ L4 SSS product comprises 9 years (2011-2019) of daily maps at 0.05 degrees. A detailed explanation of the product algorithms and validation can be found at http://bec.icm.csic.es/doc/BEC_PD_SSS_Baltic_L3_L4.pdf and in the publication: Gonzalez-Gambau et al., “First SMOS Sea Surface Salinity dedicated products over the Baltic Sea“, Earth System Science Data, 2021 We present here the seasonal averaged Baltic+ L4 SSS products for the period 2011-2019. The daily Baltic+ L4 SSS products can be downloaded from the BEC FTP service (sftp://becftp.icm.csic.es) in the directory OCEAN/SSS/SMOS/Baltic/v1.0/L4/daily/