This map presents the Special Protection Areas (SPAs) with reported wintering areas for birds. The spatial data on SPAs were gathered from the HELCOM contracting parties by Lund University, Sweden. In the data, the countries also indicated whether the sites were designated mainly due to wintering or breeding birds in the area. For Denmark, the information was obtained from standard forms for Natura 2000 sites. For Denmark, the data was updated after review process 20 February 2017. For Germany, the areas that were reported as “NA”(=information not available) were included in both breeding and wintering area maps. Many of the SPAs are both wintering and breeding areas. For the Baltic Sea Impact Index, the data was converted to 1 km x 1km grid cells.

The seals' distribution maps show the distribution and abundance of grey, harbour and ringed seals across the Baltic Sea. The ecosystem component maps on mammals' distribution were drafted by EG MAMA harbour porpoise and seal distribution teams. The maps were prepared as expert-derived distribution categories to be used in the HELCOM Third Holistic Assessment of the Ecosystem health of the Baltic Sea.

Physical loss pressure layer combines all human activities that cause physical loss of seabed. The pressure is given as area lost in each cell (km2). For the polygon datasets the area was assumed to be the lost area. For line and point datasets spatial extents were calculated with buffers (below in brackets). If no buffer extent is indicated, the data was reported as polygon. The human activities used for the physical loss pressure: - Bridges (2 m) - Cables (operational; 1,5 m) - Coastal defence and flood protection (area of polygon, 50 m for lines) - Dredging (capital dredging, Area of polygon or a 25/50 m buffer for <5000 m3 / >5000m3 points) - Extraction of sand and gravel - Finfish mariculture (150 m) - Harbours (polygon with 200 m buffer) - Land claim (area of polygon, 30m buffer for lines) - Marinas and leisure harbours (200 m) - Oil platforms (25 m) - Oil terminals and refineries (200 m) - Pipelines (operational; 15 m) - Shellfish mariculture (area of polygon, 150 m points) - Watercourse modification (50 m) - Wind turbines (operational; 30m point location of turbine) The datasets were first processed separately covering the whole Baltic Sea and then merged into one uniform data layer and minimizing the effect of overlapping areas. Polygon areas were clipped with coastline to remove buffered areas that reached to land.

This dataset is built from following Human activities datasets: • http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/81c917ea-492d-48e2-9f00-e1bb7fe3e4fc • http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/4fcd51dd-b8be-4e83-8cad-37c566782e8f The game hunting of seabirds data (see separate metadata): The total number of hunted seabirds were averaged over 2011-2015 (number of hunted seabirds / year). The area of the reporting unit was used to calculate the number of hunted seabirds / km2 and the data was converted to 1km x 1km grid. The predator control of seabirds data (see separate metadata): The total number of hunted cormorants were averaged over 2011-2015 (number of hunted cormorants / year). The area of the reporting unit was used to calculate the number of hunted cormorants / km2 and the data was converted to 1km x 1km grid. The two datasets were first separately log transformed and then summed, to get the total value for each grid cell. Zero values were given to all grid cells with no reported seabird hunting activity. The layer was normalized.

The extraction of cod pressure layer is based on two datasets: 1. http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/7a1389b3-382a-487f-8888-ac45c94c5a97 for years 2011-2016 reported per ICES statistical rectangles (tonnes / ICES rectangle). 2. http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/debeafcd-948b-4455-88ae-7a3d1618f5a8 from ICES recreational fisheries reports for 2011-2016, reported per country (only coastal areas included). Landing values were redistributed within each ICES rectangle by the c-square fishing effort data provided by ICES (all gears, 2011-2013). Tonnes / km² were calculated for both data sets and the results were converted to 1 km x 1 km grid cells. The layers were summed together, log-transformed and normalised to produce the final pressure layer on extraction of cod. Please see "lineage" section below for further details on attributes, data source, data processing, etc.

The extraction of herring data set is based on: 1. http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/a3b67a55-7c1e-469e-b692-58c4e7b79279 for years 2011-2016 reported per ICES statistical rectangles (tonnes / ICES rectangle). Landing values were redistributed within each ICES rectangle by the c-square fishing effort data provided by ICES (all gears, 2011-2013). Tonnes / km² was calculated and the results were converted to 1 km x 1 km grid cells. The layer was log-transformed and normalised to produce the final pressure layer on extraction of herring. Please see "lineage" section below for further details on attributes, data source, data processing, etc.

Essential fish habitat (EFH) map on Potential spawning areas for sprat was prepared in PanBalticScope project (co-founded by the European Maritime and Fisheries Fund of the European Union) http://www.panbalticscope.eu/ Sprat (Sprattus sprattus) occurs in the entire Baltic Sea, and mainly in open sea areas. It is assessed as a single stock in the Baltic Sea within fisheries management. Sprat eggs are pelagic, and sprat spawning is well known from the deep basins in the central Baltic, where it typically occurs from February to August. Further north, spawning starts later in the year, and is less certain. Recent fisheries surveys indicate that sprat spawning does no longer occur in the Gulf of Finland. Sprat spawning areas were delineated using environmental variables due to lack of coherent field data across the Baltic Sea countries. “Potential sprat spawning areas” were delineated as areas with salinity > 6 and water depth > 30 m, but for the Arcona basin depth > 20 m was used (Grauman, 1980, Bauman et al. 2006, Voss et al. 2012). “High probability spawning areas” were delineated for areas deeper than 70 m. Stock: Sprat in subdivisions 22-32 (ICES) EFH type: Potential spawning areas Approach: Environmental envelope, corrected for areas 20-40 m south of Bornholm. Variables and thresholds: Potential spawning area: Depth > 30 m, Salinity > 6 (annual average) High probability spawning area: Depth >70 m, Salinity > 6 (annual average) Quality: The map is based on literature and environmental variables, not actual data on sprat spawning. The map might overestimate the spawning area west and north of Gotland. The data layers on environmental variables are based on modelling. Attribute information: Raster value representing no spawning (0), potential spawning area (0.5) and high probability spawning area (1). References: - Baumann, H, H Hinrichsen, C Mollmann, F Koster, A Malzahn, and A Temming (2006) Recruitment variability in Baltic Sea sprat (Sprattus sprattus) in tightly coupled to temperature and transport patterns affecting the larval and early juvenile stages. Canadian Journal of Fisheries and Aquatic Science 63:2191-2201 - Grauman GB (1980) Long term changes in the abundance data of eggs and larvae of sprat in the Baltic Sea. Fisheries research in the Baltic Sea, Riga. 15:138-150 (in Russian) - HELCOM (2018) Outcome of the regional expert workshop on essential fish habitats, organized by Pan Baltic Scope project and HELCOM (HELCOM Pan Baltic Scope EFH WS 1-2018) - Voss R, MA Peck, HH Hinrichsen, C Clemmesen, H Baumann, D Stepputis, M Bernreuther, JO Schmidt, A Temming, and FW Köster (2012) Recruitment processes in Baltic sprat - A re-evaluation of GLOBEC Germany hypotheses. Progress in Oceanography 107:61-79

Potential cumulative impacts on benthic habitats is based on the same method than http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/9477be37-94a9-4201-824a-f079bc27d097, but is focused on physical pressures and benthic habitats. The dataset was created based on separate analysis for potential cumulative impacts on only the benthic habitats, as these are particularly affected by physical pressures. In this case the evaluation was based on pressure layers representing http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/ea0ef0fa-0517-40a9-866a-ce22b8948c88 and http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/05e325f3-bc30-44a0-8f0b-995464011c82, combined with information on the distribution of eight broad benthic habitat types and five habitat-forming species (http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/363cb353-46da-43f4-9906-7324738fe2c3, http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/f9cc7b2c-4080-4b19-8c38-cac87955cb91, http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/264ed572-403c-43bd-9707-345de8b9503c, http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/822ddece-d96a-4036-9ad8-c4b599776eca and http://metadata.helcom.fi/geonetwork/srv/eng/catalog.search#/metadata/ca327bb1-d3cb-46c2-8316-f5f62f889090). The potential cumulative impacts has been estimated based on currently best available data, but spatial and temporal gaps may occur in underlying datasets. Please scroll down to "Lineage" and visit http://stateofthebalticsea.helcom.fi/cumulative-impacts/ for more info.

'Availability of deep water habitat, based on occurrence of H2S' layer describes the suitability of the bottom areas for the Baltic Sea biota, with regard to oxygen conditions of the near bottom waters. The data used to produce the layer was received from Leibniz-Institut für Ostseeforschung Warnemünde (IOW): - areas (polygons) with hydrogen sulfide (H2S) based on point measurements and modelling. Five time periods / year, for years 2011-2016 (altogether 30 layers). The polygons were converted to raster layers in a way, that for each time period (6 years, 5 time periods each year), areas with H2S got a value 0, other areas got the value 1. All layers were summed, (representing 6 years, 5 time periods each year, maximum value 30) and data was normalised. For more detailed information on the data used, please see Feistel et al. 2016.

Broad-scale habitat maps for the Baltic Sea have been produced in the EUSeaMap project in 2016. For German and Estonian marine areas, national (more accurate) datasets were used. German data included both substrate and light information (division into infralittoral/circalittoral). Estonian data included only substrate and the division into light regimes was obtained from the EuSeaMap data. Here, the habitat class “circalittoral mud” includes classes “Fine mud”, “Sandy mud” and “Mud to sandy mud” of the original data, in the circalittoral zone. The original polygon maps have been converted to 1 km x 1 km grid. The scale of the substrate data used in broad-scale habitat maps varies from 1:250 000 to 1:1M (data from EMODnet Geology). Coarser resolution data has been used in areas, where 1: 250 000 substrate data has not been available. Due to different scales used, the habitat classes may show different sized patterns in different areas.